STRINGSTRING
Phatr19669 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19669" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19669Predicted protein (202 aa)    
Predicted Functional Partners:
Phatr49632
Predicted protein (420 aa)
     
  0.977
Phatr28874
Predicted protein (410 aa)
     
  0.977
Phatr44534
Predicted protein (417 aa)
       
  0.976
Phatr16493
Predicted protein (214 aa)
     
  0.876
Phatr49220
Predicted protein (217 aa)
     
  0.864
Phatr32097
Predicted protein (368 aa)
     
  0.827
Phatr30898
Vacuolar protein (429 aa)
     
  0.827
Phatr38893
Predicted protein (174 aa)
     
  0.815
Phatr6433
Predicted protein (143 aa)
     
  0.728
Phatr5904
Predicted protein (206 aa)
     
  0.728
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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