STRINGSTRING
Phatr19690 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19690" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19690Predicted protein (173 aa)    
Predicted Functional Partners:
Phatr55230
Predicted protein (709 aa)
     
  0.676
HSP90
Heat shock protein Hsp90 (780 aa)
     
  0.676
Phatr18793
Predicted protein (750 aa)
     
  0.676
Phatr21660
Predicted protein (2400 aa)
       
  0.651
Phatr22113
Bifunctional aspartokinase (870 aa)
     
 
  0.631
Phatr16786
Predicted protein (716 aa)
     
  0.589
Phatr8777
Predicted protein (110 aa)
     
      0.581
Phatr12254
Predicted protein (112 aa)
 
       
0.578
HSP70A
Protein heat shock protein Hsp70 (653 aa)
   
  0.544
HSP70B
Protein heat shock protein (681 aa)
   
  0.544
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (8%) [HD]