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Phatr19692 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19692" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19692Predicted protein (356 aa)    
Predicted Functional Partners:
Phatr25183
Predicted protein (334 aa)
     
 
  0.850
Phatr48112
Predicted protein (387 aa)
   
 
  0.810
Phatr15423
Predicted protein (367 aa)
   
 
  0.810
CPS-II
Predicted protein (1542 aa)
     
   
  0.807
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
     
   
  0.807
Phatr11740
Predicted protein (229 aa)
   
   
  0.680
Phatr47067
Predicted protein (1237 aa)
   
   
  0.612
Phatr27735
Predicted protein (538 aa)
     
   
  0.599
PGP
2-phosphoglycolate phosphatase (314 aa)
       
      0.522
Phatrdraft1048
Annotation not available (148 aa)
       
      0.522
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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