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DPM1 protein (Phaeodactylum tricornutum) - STRING interaction network
"DPM1" - Dolichyl-phosphate mannosyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPM1Dolichyl-phosphate mannosyltransferase (236 aa)    
Predicted Functional Partners:
Phatr10976
Mannosyltransferase (370 aa)
       
  0.962
Phatr14002
Beta-mannosyltransferase (398 aa)
   
  0.960
Phatr9724
Predicted protein (371 aa)
   
 
  0.944
Phatr45980
Predicted protein (348 aa)
     
 
  0.943
Phatr34317
Dolichol phosphate glucosyltransferase (320 aa)
     
 
  0.943
Phatr48523
Predicted protein (551 aa)
         
    0.900
Phatr18303
Mannosyl transferase (487 aa)
     
  0.886
Phatr44790
Predicted protein (586 aa)
       
  0.883
GMD1
Gdp-mannose 4,6-dehydratase (363 aa)
   
 
  0.877
Phatrdraft1666
Predicted protein (558 aa)
     
  0.869
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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