STRINGSTRING
Phatr1971 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr1971" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr1971Predicted protein (492 aa)    
Predicted Functional Partners:
Phatr42917
Predicted protein (509 aa)
     
  0.945
Phatr43469
Predicted protein (320 aa)
       
  0.944
Phatr8860
Annotation not available (577 aa)
     
 
  0.941
Phatr9794
Predicted protein (404 aa)
         
  0.935
Phatr43773
Predicted protein (398 aa)
     
 
  0.932
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
       
  0.931
Phatr12431
Predicted protein (801 aa)
       
  0.909
Phatr14202
Predicted protein (312 aa)
     
 
    0.906
Phatr3262
Predicted protein (220 aa)
         
  0.904
Phatr37086
Predicted protein (226 aa)
         
  0.903
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (6%) [HD]