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STRINGSTRING
Phatr19761 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr19761" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr19761Predicted protein (702 aa)    
Predicted Functional Partners:
Phatr29824
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1177 aa)
     
 
  0.939
GluRS_1
Glutamate-trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family (523 aa)
   
 
  0.906
Phatr11722
Predicted protein (354 aa)
   
   
  0.847
Phatr33493
Predicted protein (684 aa)
     
 
  0.820
Phatr18524
Predicted protein (766 aa)
     
 
  0.820
Phatr27323
Tyrosine--tRNA ligase (488 aa)
   
   
  0.807
Phatr11088
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1086 aa)
   
   
  0.792
Phatr47999
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (955 aa)
   
 
  0.790
Phatr15186
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (959 aa)
   
 
  0.790
GluRS_2
Glutamyl-trna synthase; Belongs to the class-I aminoacyl-tRNA synthetase family (588 aa)
   
 
  0.786
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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