STRINGSTRING
AOX1 protein (Phaeodactylum tricornutum) - STRING interaction network
"AOX1" - Precursor of oxidase acyl-coa oxidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOX1Precursor of oxidase acyl-coa oxidase (706 aa)    
Predicted Functional Partners:
Phatr35240
Predicted protein (684 aa)
   
  0.993
KCT1
Beta-ketoacyl-coa thiolase (386 aa)
   
 
  0.983
KCT3
Beta-ketoacyl-CoA thiolase (457 aa)
   
 
  0.979
Phatr23913
Acetyl-coa c-acetyltransferase (396 aa)
   
 
  0.978
Phatr55192
Hydratase enyol-coa hydratase (269 aa)
   
  0.975
Phatr45947
Predicted protein (403 aa)
   
 
  0.974
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
  0.939
Phatr25572
Predicted protein (470 aa)
         
  0.935
ACC2
Biotin carboxylase (2282 aa)
   
 
  0.882
ACD1
Short chain acyl-coenzyme A dehydrogenase (436 aa)
         
  0.847
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (11%) [HD]