STRINGSTRING
ACS1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ACS1" - Long chain acyl-coa synthetase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS1Long chain acyl-coa synthetase (721 aa)    
Predicted Functional Partners:
Phatr12420
Predicted protein (633 aa)
   
 
0.874
ACS4
Long chain acyl-coa synthetase (663 aa)
   
 
0.874
ACL1
Precursor of ligase long chain acyl-coa ligase (678 aa)
   
 
0.863
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
 
  0.818
Phatr35240
Predicted protein (684 aa)
   
 
  0.818
Phatr10454
Predicted protein (298 aa)
       
  0.816
Phatr1971
Predicted protein (492 aa)
   
 
  0.811
Phatr43856
Predicted protein (985 aa)
         
    0.800
NRPS
Non ribosomal peptide synthase (1367 aa)
   
   
  0.732
ACC1
Acetyl-coa carboxylase (2092 aa)
   
 
  0.698
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%) [HD]