STRINGSTRING
Phatr20167 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr20167" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr20167Predicted protein (87 aa)    
Predicted Functional Partners:
Phatr15709
Predicted protein (100 aa)
     
  0.999
Phatr20588
Predicted protein (87 aa)
     
  0.999
Phatr51100
Predicted protein (110 aa)
     
  0.999
Phatr35063
Predicted protein (165 aa)
     
  0.999
Phatr33304
Predicted protein (122 aa)
     
  0.999
Phatr10583
Predicted protein (94 aa)
     
  0.993
Phatr13360
Predicted protein (226 aa)
     
  0.988
Phatr12161
Predicted protein (250 aa)
     
  0.986
Phatr42364
Predicted protein (89 aa)
     
  0.986
Phatr8840
Predicted protein (93 aa)
     
  0.985
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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