STRINGSTRING
CDKA1 protein (Phaeodactylum tricornutum) - STRING interaction network
"CDKA1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDKA1Predicted protein (290 aa)    
Predicted Functional Partners:
CDC6
Predicted protein (1107 aa)
     
  0.964
MYT1
Predicted protein (1108 aa)
     
  0.963
dsCYC5
Predicted protein (297 aa)
     
  0.945
dsCYC1
Predicted protein (330 aa)
     
  0.941
CYCB1
Predicted protein (303 aa)
 
 
  0.941
dsCYC3
Predicted protein (301 aa)
     
  0.935
CYCD1
Predicted protein (222 aa)
     
  0.935
CYCB2
Predicted protein (64 aa)
     
  0.934
Phatr42935
Predicted protein (588 aa)
     
  0.917
Phatr43757
Cyc-like protein (491 aa)
     
  0.910
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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