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STRINGSTRING
Phatr20335 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr20335" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr20335Predicted protein (665 aa)    
Predicted Functional Partners:
Phatr11785
Predicted protein (631 aa)
     
 
  0.918
Phatr54743
Predicted protein (347 aa)
     
 
  0.896
Phatr13053
Predicted protein (725 aa)
     
 
  0.870
Phatr27039
Predicted protein (634 aa)
     
 
  0.853
Phatr20135
Predicted protein (690 aa)
     
 
  0.851
Phatr16704
Predicted protein (1045 aa)
     
 
  0.848
Phatr49469
Predicted protein (522 aa)
     
 
  0.835
Phatr12516
Predicted protein (147 aa)
     
 
  0.834
Phatr14572
Predicted protein (219 aa)
     
 
  0.833
Phatr45319
Predicted protein (1013 aa)
     
 
  0.830
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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