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GltD protein (Phaeodactylum tricornutum) - STRING interaction network
"GltD" - Synthase of glutamate synthase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GltDSynthase of glutamate synthase (580 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
  0.999
Phatr24739
Predicted protein (1594 aa)
  0.998
Phatr51092
Glutamine synthetase (416 aa)
   
 
  0.966
Phatr13951
Predicted protein (450 aa)
   
  0.962
GLNA
GLNA, glutamine synthase (716 aa)
       
  0.954
GFA1
Glutamine-fructose-6-phosphate transaminase (606 aa)
     
  0.909
Phatr31906
Aldehyde dehydrogenase (551 aa)
     
 
  0.909
Phatr45239
Predicted protein (1097 aa)
       
  0.907
ACL
Atp-citrate synthase (1082 aa)
   
 
  0.905
Phatr15536
Predicted protein (313 aa)
       
  0.902
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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