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STRINGSTRING
Phatr20677 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr20677" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr20677Predicted protein (236 aa)    
Predicted Functional Partners:
Phatr48864
Reductase with NAD or NADP as acceptor; Belongs to the 3-beta-HSD family (395 aa)
   
   
  0.726
PHATR_645
Terpene cyclase/mutase family member; Acetyl-coenzyme A synthetase; Belongs to the terpene cyclase/mutase family (678 aa)
           
  0.614
Phatr44189
Predicted protein (1560 aa)
         
  0.593
Phatr9709
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (71 aa)
   
   
  0.515
ACPZ
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (127 aa)
   
   
  0.515
PTD9
Desaturase delta 9 desaturase; Belongs to the fatty acid desaturase type 1 family (333 aa)
   
 
  0.513
Phatr9255
Elongation of fatty acids protein (278 aa)
     
 
  0.506
ELO6b_1
Elongation of fatty acids protein; Delta 6 desaturase (216 aa)
     
 
  0.506
ELO6b_2
Elongation of fatty acids protein; Elongase delta 6 elongase (278 aa)
     
 
  0.506
Phatr46586
Predicted protein (514 aa)
     
 
  0.489
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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