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Phatr20716 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr20716" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr20716Predicted protein (138 aa)    
Predicted Functional Partners:
Phatr33540
Predicted protein (155 aa)
     
  0.998
Phatr25743
Predicted protein (414 aa)
     
  0.965
Phatr25184
Predicted protein (623 aa)
     
  0.965
Phatr41785
Predicted protein (370 aa)
     
  0.951
helicase_5
Predicted protein (428 aa)
     
  0.804
Phatr50132
Predicted protein (1477 aa)
       
  0.776
Phatrdraft920
Predicted protein (575 aa)
     
  0.754
Phatr47365
Predicted protein (603 aa)
     
  0.754
Phatr39714
Predicted protein (531 aa)
     
  0.754
Phatr27821
Predicted protein (822 aa)
     
  0.754
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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