STRINGSTRING
ARP protein (Phaeodactylum tricornutum) - STRING interaction network
"ARP" - Actin related protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARPActin related protein (463 aa)    
Predicted Functional Partners:
Phatr19568
Predicted protein (485 aa)
     
  0.975
Phatr45548
Predicted protein (613 aa)
     
  0.960
hBRM
Predicted protein (995 aa)
     
  0.953
Phatr42892
Predicted protein (4067 aa)
       
  0.936
Phatr50825
Predicted protein (451 aa)
     
  0.919
Phatr6586
Predicted protein (152 aa)
     
  0.856
Phatr47992
Predicted protein (432 aa)
       
  0.836
ARP1
Actin related protein (391 aa)
       
0.803
Phatr3281
Predicted protein (354 aa)
     
 
  0.800
Phatr51406
Predicted protein (297 aa)
       
  0.795
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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