STRINGSTRING
Phatr20948 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr20948" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr20948Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)    
Predicted Functional Partners:
Phatr26515
Predicted protein (272 aa)
   
  0.993
petC
Cytochrome b6-f complex iron-sulfur subunit (217 aa)
   
  0.973
Phatr13358
Cytochrome b6-f complex iron-sulfur subunit (178 aa)
   
  0.973
Phatr12233
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (179 aa)
   
  0.973
Phatr20787
Predicted protein (473 aa)
     
  0.968
Phatr44482
Predicted protein (600 aa)
       
  0.943
Phatr19901
Predicted protein (900 aa)
     
 
  0.910
Phatr46040
Predicted protein (359 aa)
     
 
  0.906
Phatr46031
Predicted protein (359 aa)
     
 
  0.906
Phatr17215
Predicted protein (297 aa)
     
 
  0.906
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (6%) [HD]