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PHATR_645 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_645" - Acetyl-coenzyme A synthetase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_645Acetyl-coenzyme A synthetase (678 aa)    
Predicted Functional Partners:
Phatr31339
Predicted protein (482 aa)
   
 
  0.867
Phatr10852
Predicted protein (167 aa)
     
 
  0.854
Phatr13160
Predicted protein (314 aa)
 
   
  0.846
Phatr48864
Reductase with NAD or NADP as acceptor (395 aa)
 
 
  0.833
Phatr14208
Predicted protein (249 aa)
     
 
  0.815
Phatr43981
Predicted protein (418 aa)
       
 
  0.757
Phatr33530
Predicted protein (392 aa)
       
 
  0.757
TMT
Tocopherol o-methyltransferase (318 aa)
       
 
  0.757
Phatr10824
Predicted protein (304 aa)
       
 
  0.757
PSY
Phytoene synthase (309 aa)
   
   
  0.697
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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