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STRINGSTRING
Phatr21116 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21116" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21116Predicted protein; Argininosuccinate synthase (418 aa)    
Predicted Functional Partners:
Phatr30514
Predicted protein; Belongs to the ATCase/OTCase family (351 aa)
 
 
  0.999
Phatr34526
Predicted protein (440 aa)
 
 
  0.999
Phatr18337
Predicted protein (596 aa)
   
  0.993
Phatr36913
Predicted protein (357 aa)
   
   
  0.984
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
 
  0.981
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity); Belongs to the adenylosuccinate synthetase family (526 aa)
   
 
  0.966
Phatr12762
Predicted protein (282 aa)
   
   
  0.962
Phatr38509
Arginase; Belongs to the arginase family (301 aa)
     
   
  0.960
CPS-II
Predicted protein (1542 aa)
 
 
  0.953
Phatr51092
Glutamine synthetase (416 aa)
     
   
  0.941
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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