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Phatr21116 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21116" - Argininosuccinate synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21116Argininosuccinate synthase (418 aa)    
Predicted Functional Partners:
Phatr34526
Predicted protein (440 aa)
 
 
  0.999
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
 
  0.999
CPS-II
Predicted protein (1542 aa)
 
 
  0.995
Phatr30514
Predicted protein (351 aa)
   
 
  0.994
Phatr10902
Predicted protein (473 aa)
   
 
  0.992
Phatr36913
Predicted protein (357 aa)
   
   
  0.983
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity) (526 aa)
   
 
  0.944
Phatr18337
Predicted protein (596 aa)
     
  0.944
Phatr22113
Bifunctional aspartokinase (870 aa)
   
 
  0.929
Phatr3969
Predicted protein (256 aa)
   
   
  0.920
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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