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Phatr21354 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21354" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21354Predicted protein (422 aa)    
Predicted Functional Partners:
Phatr16147
Predicted protein (200 aa)
   
  0.935
Phatrdraft1384
Predicted protein (343 aa)
   
 
  0.862
Phatr26515
Predicted protein (272 aa)
   
  0.862
Phatr11016
Predicted protein (91 aa)
         
  0.858
Phatr32550
Predicted protein (393 aa)
   
 
  0.837
Phatr36600
Predicted protein (139 aa)
         
    0.800
Phatr14770
Predicted protein (171 aa)
   
 
  0.762
Phatr6437
Predicted protein (212 aa)
 
   
      0.604
Phatr7342
Predicted protein (106 aa)
 
       
  0.594
Phatr14478
Predicted protein (112 aa)
 
       
  0.590
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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