STRINGSTRING
hCDK1 protein (Phaeodactylum tricornutum) - STRING interaction network
"hCDK1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hCDK1Predicted protein (380 aa)    
Predicted Functional Partners:
Phatr9491
Predicted protein (163 aa)
   
0.969
Phatr7634
Predicted protein (103 aa)
       
  0.947
Phatr46490
Predicted protein (268 aa)
       
  0.947
Phatr47992
Predicted protein (432 aa)
       
  0.901
Phatr10539
Predicted protein (328 aa)
   
 
0.838
Phatr45431
Predicted protein (1158 aa)
       
  0.835
PHATR_4994
Predicted protein (209 aa)
 
 
  0.825
hCDK7
Predicted protein (358 aa)
   
   
 
0.811
Phatr9890
Predicted protein (282 aa)
       
  0.793
Phatr9157
Predicted protein (299 aa)
       
  0.793
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (2%) [HD]