STRINGSTRING
Phatr21420 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21420" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21420Predicted protein (743 aa)    
Predicted Functional Partners:
Phatr51345
Histone acetyltransferase (149 aa)
       
 
  0.965
Phatr14339
Annotation not available (174 aa)
       
 
  0.965
Phatr28723
Predicted protein (175 aa)
       
 
  0.848
Phatr24408
N-acetyl transferase (198 aa)
       
 
  0.847
Phatr7294
Predicted protein (160 aa)
       
      0.625
Phatr7293
Predicted protein (160 aa)
       
      0.625
Phatr13208
Predicted protein (145 aa)
       
      0.625
Phatr47883
Predicted protein (1054 aa)
     
 
  0.575
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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