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Phatr21543 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21543" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21543Predicted protein (366 aa)    
Predicted Functional Partners:
Phatr45431
Predicted protein (1158 aa)
   
  0.804
Phatr19615
Predicted protein (121 aa)
       
      0.627
Phatr8891
Predicted protein (223 aa)
   
  0.618
Phatr50482
Predicted protein (1188 aa)
   
  0.618
Phatr45906
Predicted protein (693 aa)
   
  0.618
Phatr4423
Predicted protein (284 aa)
   
  0.618
Phatr43919
Predicted protein (407 aa)
   
  0.618
Phatr35869
Predicted protein (534 aa)
   
  0.618
Phatr9278
Predicted protein (294 aa)
   
  0.591
ACC2
Biotin carboxylase (2282 aa)
   
 
  0.581
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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