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STRINGSTRING
Phatr21744 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21744" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21744Predicted protein (149 aa)    
Predicted Functional Partners:
Phatr1690
Predicted protein (495 aa)
     
 
  0.800
CaM1
Calmoduline (149 aa)
         
 
0.800
Phatr45020
Predicted protein (592 aa)
     
 
  0.644
Phatr15929
Predicted protein (202 aa)
       
 
  0.630
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
     
 
  0.550
Phatr46058
Formin like protein (2015 aa)
       
 
  0.538
myoB1
Predicted protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family (763 aa)
       
 
  0.531
Phatr21122
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
     
 
  0.501
Phatr47589
Predicted protein (422 aa)
       
 
  0.482
Phatr44535
Predicted protein (1283 aa)
     
 
  0.475
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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