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Phatr21897 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21897" - G protein beta subunit in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21897G protein beta subunit (351 aa)    
Predicted Functional Partners:
Phatr36721
Predicted protein (323 aa)
     
  0.987
Phatr27639
Predicted protein (373 aa)
       
  0.949
Ras1
Predicted protein (191 aa)
       
  0.877
Phatr47992
Predicted protein (432 aa)
       
  0.820
hCDK1
Predicted protein (380 aa)
       
  0.790
hCDK7
Predicted protein (358 aa)
       
  0.790
Phatr48350
Predicted protein (1773 aa)
       
  0.745
Phatr28694
Predicted protein (316 aa)
 
 
0.688
Phatr49666
Predicted protein (540 aa)
       
  0.632
Phatr43724
Predicted protein (890 aa)
       
  0.632
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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