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Phatr21922 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr21922" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr21922Predicted protein (306 aa)    
Predicted Functional Partners:
Phatr3351
Predicted protein (281 aa)
     
 
  0.596
Phatr19122
Predicted protein (322 aa)
     
 
  0.596
Phatr35185
Predicted protein (448 aa)
 
   
  0.595
Phatr17172
Predicted protein (551 aa)
 
   
  0.583
FABD
Malonyl-CoA-ACP transacylase (352 aa)
     
      0.555
Phatr11099
Predicted protein (511 aa)
 
 
  0.530
Phatr42826
Predicted protein (1192 aa)
   
   
  0.495
Phatr29702
Predicted protein (878 aa)
           
  0.461
Phatr2271
GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis (489 aa)
   
   
0.454
Phatr45509
Predicted protein (723 aa)
         
  0.448
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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