STRINGSTRING
PPdK protein (Phaeodactylum tricornutum) - STRING interaction network
"PPdK" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPdKPredicted protein (1011 aa)    
Predicted Functional Partners:
PEPCase_2
Predicted protein (877 aa)
         
  0.963
ME1
Malic enzyme (560 aa)
       
  0.963
Phatr51970
Malic enzyme (555 aa)
       
  0.963
PYC2
Precursor of carboxylase pyruvate carboxylase (1264 aa)
       
  0.933
PDHA1
Precursor of dehydrogenase pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (413 aa)
       
  0.933
Phatrdraft475
Predicted protein (464 aa)
       
  0.932
Phatr34010
Predicted protein (475 aa)
       
  0.932
PDHB1
Precursor of dehydrogenase pyruvate dehydrogenase E1 component beta subunit (360 aa)
       
  0.926
Phatr55040
D-lactate dehydrogenase (506 aa)
       
  0.923
PYC1
Precursor of carboxylase pyruvate carboxylase (1252 aa)
       
  0.916
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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