STRINGSTRING
Phatr22027 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22027" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22027Predicted protein (92 aa)    
Predicted Functional Partners:
Phatr8363
Predicted protein (84 aa)
     
  0.997
Phatr7114
Predicted protein (136 aa)
     
  0.746
Phatrdraft218
Predicted protein (125 aa)
       
  0.686
Phatr13254
Predicted protein (115 aa)
       
  0.637
Phatr45880
Predicted protein (135 aa)
     
        0.574
Phatr22873
Predicted protein (303 aa)
     
  0.561
Phatr15797
Predicted protein (303 aa)
     
  0.561
Phatr44351
Predicted protein (510 aa)
     
   
  0.464
Phatr3171
Predicted protein (220 aa)
     
   
  0.460
Phatr21430
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (541 aa)
     
 
    0.448
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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