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GDCP protein (Phaeodactylum tricornutum) - STRING interaction network
"GDCP" - Glycine decarboxylase p-protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDCPGlycine decarboxylase p-protein (1005 aa)    
Predicted Functional Partners:
GDCT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine (421 aa)
 
 
  0.999
GDCH
Glycine decarboxylase (157 aa)
 
  0.999
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine (464 aa)
   
 
  0.994
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine (501 aa)
   
 
  0.994
SHMT
Serine hydroxymethyltransferase; Interconversion of serine and glycine (473 aa)
   
 
  0.994
pDLDH1
Lipoamide dehydrogenase (543 aa)
   
 
  0.987
DLDH
Dihydrolipoyl dehydrogenase (500 aa)
   
 
  0.987
Phatr49372
Predicted protein (400 aa)
       
  0.976
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
     
 
  0.951
Phatr31906
Aldehyde dehydrogenase (551 aa)
   
  0.924
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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