STRINGSTRING
ELO6b_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"ELO6b_1" - Delta 6 desaturase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELO6b_1Delta 6 desaturase (216 aa)    
Predicted Functional Partners:
ACC2
Biotin carboxylase (2282 aa)
     
 
  0.481
Phatr20677
Predicted protein (236 aa)
       
 
  0.474
Phatr10213
Predicted protein (182 aa)
       
 
  0.474
Phatr41807
Predicted protein (407 aa)
       
 
  0.472
ACC1
Acetyl-coa carboxylase (2092 aa)
     
 
  0.422
LAG1
Longevity assurance protein (332 aa)
     
 
  0.421
Phatr46595
Predicted protein (480 aa)
     
 
  0.421
Phatr15692
Predicted protein (109 aa)
       
 
  0.406
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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