STRINGSTRING
CUL1_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"CUL1_1" - CULlin protein 3 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL1_1CULlin protein 3 (762 aa)    
Predicted Functional Partners:
Rbx1
Predicted protein (134 aa)
       
  0.974
Phatr48810
Ubiquitin carrier protein (220 aa)
       
  0.967
Phatr46608
Predicted protein (1443 aa)
     
 
  0.947
CSN5
COP9 SigNalosome subunit 5 (370 aa)
     
  0.931
Skp1_3
S-phase kinase-associated protein (158 aa)
     
  0.912
Skp1;2
Predicted protein (175 aa)
     
  0.912
Skp1_1
Predicted protein (169 aa)
     
  0.912
Phatr9649
Predicted protein (102 aa)
       
  0.894
Phatr46419
Predicted protein (816 aa)
     
  0.889
DDB1
Damage-specific DNA binding protein 1 (1284 aa)
     
  0.878
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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