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Phatr22418 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22418" - Catalase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22418Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)    
Predicted Functional Partners:
GOX
Glycolate oxidase (381 aa)
     
 
  0.953
Phatr50084
Predicted protein (260 aa)
   
  0.879
Phatr14785
Predicted protein (176 aa)
   
  0.879
gshB
Glutathione synthase. glutathione synthetase. GSH synthetase (567 aa)
       
 
  0.860
Gsr_2
Glutathione reductase (496 aa)
   
 
  0.848
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
       
  0.809
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
       
  0.809
Phatr20504
Annotation not available (886 aa)
     
   
  0.807
TPS2
Bifunctional trehalose-6-phosphate synthase (779 aa)
     
   
  0.807
Phatr27240
Predicted protein (746 aa)
     
 
  0.778
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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