STRINGSTRING
Phatr22629 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22629" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22629Predicted protein (1367 aa)    
Predicted Functional Partners:
Phatr49856
Predicted protein (810 aa)
   
0.656
Phatr44752
Predicted protein (382 aa)
 
0.651
Phatr25217
Predicted protein (635 aa)
   
0.649
Phatr50096
Predicted protein (640 aa)
   
0.649
Phatr44756
Predicted protein (641 aa)
   
0.649
Phatr31433
Predicted protein (641 aa)
   
0.649
Phatr34685
Predicted protein (602 aa)
   
0.648
Phatr25218
Predicted protein (545 aa)
   
0.647
Phatr49726
Predicted protein (741 aa)
   
0.647
Phatr14778
Predicted protein (515 aa)
   
0.645
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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