STRINGSTRING
Phatr22739 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22739" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22739Predicted protein (396 aa)    
Predicted Functional Partners:
Phatr9444
Predicted protein (297 aa)
     
   
  0.441
Phatr3940
Predicted protein (268 aa)
     
   
  0.441
Phatr16341
Predicted protein (323 aa)
     
   
  0.441
Phatr9609
Predicted protein (322 aa)
     
   
  0.435
Tpt4
Predicted protein (367 aa)
     
   
  0.415
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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