Full Link:
STRINGSTRING
Phatr22868 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22868" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22868Predicted protein (551 aa)    
Predicted Functional Partners:
Phatr12394
Predicted protein (260 aa)
     
 
  0.985
Phatr25666
Predicted protein (885 aa)
     
   
0.958
Phatr2182
Predicted protein (360 aa)
     
 
  0.951
Phatr45828
Predicted protein (805 aa)
     
 
  0.944
Phatr43105
Predicted protein (455 aa)
     
 
  0.928
Phatr30365
Predicted protein; Involved in the biogenesis of the 60S ribosomal subunit (677 aa)
     
 
  0.928
Phatr25133
Predicted protein (562 aa)
     
 
  0.923
Phatr21996
Predicted protein (417 aa)
     
   
  0.912
Phatr15862
Predicted protein (530 aa)
     
   
  0.912
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
 
  0.907
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (4%)