STRINGSTRING
Phatr22873 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22873" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22873Predicted protein (303 aa)    
Predicted Functional Partners:
atpB
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane (501 aa)
     
  0.845
Phatr8987
Predicted protein (320 aa)
     
  0.828
Phatr47954
Predicted protein (334 aa)
     
  0.828
Phatr22315
Predicted protein (326 aa)
     
  0.828
Phatr22279
Predicted protein (323 aa)
     
  0.828
Phatr19030
Predicted protein (318 aa)
     
  0.828
Phatr11866
Predicted protein (286 aa)
     
  0.828
Phatr11414
Predicted protein (295 aa)
     
  0.828
ACL
Atp-citrate synthase (1082 aa)
     
  0.795
Phatr8363
Predicted protein (84 aa)
     
  0.775
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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