• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr22909 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22909" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22909Predicted protein (443 aa)    
Predicted Functional Partners:
Phatr34582
Predicted protein (334 aa)
       
  0.932
Phatr4025
Predicted protein (278 aa)
     
 
  0.908
Phatr31147
Probable methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) (559 aa)
   
   
  0.527
Phatr17238
Anthranilate synthase (958 aa)
   
 
  0.491
Phatr41702
Predicted protein (671 aa)
   
 
  0.408
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (9%) [HD]