STRINGSTRING
Phatr22955 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr22955" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr22955Predicted protein (311 aa)    
Predicted Functional Partners:
Phatr3145
Predicted protein (324 aa)
         
  0.933
Phatr8765
Predicted protein (287 aa)
 
 
  0.917
Phatr16540
Aldehyde dehydrogenase (432 aa)
       
  0.904
Phatr12107
Predicted protein (460 aa)
         
  0.697
Phatr39578
Predicted protein (414 aa)
   
 
  0.601
Phatr16595
Annotation not available (129 aa)
   
 
  0.601
Phatrdraft1682
Anthranilate synthase (927 aa)
       
  0.599
Phatr17238
Anthranilate synthase (958 aa)
       
  0.599
Phatr19901
Predicted protein (900 aa)
         
  0.524
Phatrdraft348
Predicted protein (521 aa)
         
  0.507
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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