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TufA protein (Phaeodactylum tricornutum) - STRING interaction network
"TufA" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TufAPredicted protein; Elongation factor Tu (426 aa)    
Predicted Functional Partners:
atpB
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane (501 aa)
   
   
  0.969
rpl2
Predicted protein (257 aa)
   
 
  0.968
rpl20
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (98 aa)
   
 
  0.961
Phatr33660
Predicted protein (253 aa)
   
 
  0.943
Phatr29097
Predicted protein; Belongs to the universal ribosomal protein uS7 family (225 aa)
   
 
  0.941
Phatr23324
Predicted protein; Belongs to the universal ribosomal protein uL5 family (176 aa)
   
 
  0.941
Atp1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane (509 aa)
   
   
  0.934
Phatr42848
Predicted protein; Belongs to the universal ribosomal protein uS5 family (380 aa)
   
 
  0.930
Phatr50886
Predicted protein (145 aa)
   
 
  0.928
rps19
Predicted protein; Belongs to the universal ribosomal protein uS19 family (147 aa)
   
 
  0.923
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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