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TufA protein (Phaeodactylum tricornutum) - STRING interaction network
"TufA" - Elongation factor Tu in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TufAElongation factor Tu (426 aa)    
Predicted Functional Partners:
Phatr51291
Predicted protein (121 aa)
   
  0.984
Phatr31768
Predicted protein (284 aa)
   
  0.983
Phatr33660
Predicted protein (253 aa)
   
 
  0.962
Phatr29097
Predicted protein (225 aa)
   
  0.961
Phatr28147
Predicted protein (62 aa)
   
  0.958
Phatr48411
Predicted protein (264 aa)
   
  0.958
Phatr42848
Predicted protein (380 aa)
   
  0.958
Phatr23691
Predicted protein (130 aa)
   
 
  0.955
Phatr13682
Predicted protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (220 aa)
     
  0.947
Phatr50886
Predicted protein (145 aa)
   
  0.947
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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