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METH protein (Phaeodactylum tricornutum) - STRING interaction network
"METH" - Methionine synthase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
METHMethionine synthase (1245 aa)    
Predicted Functional Partners:
Phatr30471
Methylenetetrahydrofolate reductase (376 aa)
   
 
  0.991
Phatr28431
Methylenetetrahydrofolate reductase (634 aa)
   
 
  0.991
Phatr18319
Adenosylhomocysteinase (481 aa)
       
  0.991
Phatrdraft913
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (386 aa)
   
 
  0.985
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine (464 aa)
       
  0.983
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine (501 aa)
       
  0.983
SHMT
Serine hydroxymethyltransferase; Interconversion of serine and glycine (473 aa)
       
  0.981
Phatr49903
Predicted protein (654 aa)
       
  0.976
Phatr15917
Cystathionine gamma-lyase (392 aa)
       
  0.976
GDCT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine (421 aa)
       
  0.973
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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