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Phatr23429 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23429" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23429Predicted protein (615 aa)    
Predicted Functional Partners:
Phatr47067
Predicted protein (1237 aa)
 
  0.998
Phatr17772
Predicted protein (1313 aa)
   
 
  0.995
Phatr25204
Predicted protein (598 aa)
 
 
  0.993
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
   
  0.991
Phatr18080
Phosphoribosylaminoimidazole-succinocarboxamide synthase (268 aa)
   
 
  0.990
Phatr18087
Adenylosuccinate lyase (499 aa)
   
  0.987
Phatr8717
Serine hydroxymethyltransferase; Interconversion of serine and glycine (464 aa)
   
  0.986
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine (501 aa)
   
  0.986
SHMT
Serine hydroxymethyltransferase; Interconversion of serine and glycine (473 aa)
   
  0.986
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity) (526 aa)
   
  0.976
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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