STRINGSTRING
Phatr23467 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23467" - Dehydrogenase methylmalonate-semialdhyde dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23467Dehydrogenase methylmalonate-semialdhyde dehydrogenase (537 aa)    
Predicted Functional Partners:
Phatr45141
Oxidoreductase (332 aa)
   
  0.959
Phatrdraft645
Acetyl-coenzyme A synthetase (732 aa)
     
 
    0.936
Phatr22974
Acetate-coa, ligase (675 aa)
     
 
    0.936
Phatr45886
Predicted protein (581 aa)
     
 
  0.932
ACC2
Biotin carboxylase (2282 aa)
     
 
  0.923
Phatr51245
Carboxylase propionyl-coa carboxylase (664 aa)
     
 
  0.921
ACC1
Acetyl-coa carboxylase (2092 aa)
     
 
  0.921
Phatr23913
Acetyl-coa c-acetyltransferase (396 aa)
     
 
    0.921
HAD2
3-hydroxyacyl-coenzyme A dehydrogenase (329 aa)
 
 
 
  0.917
DHLTA_4
Dihydrolipoamide acetyl transferase (525 aa)
     
 
  0.915
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (10%) [HD]