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Phatr23582 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23582" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23582Predicted protein (764 aa)    
Predicted Functional Partners:
Phatr29967
Predicted protein (871 aa)
     
 
  0.922
Phatr45915
Predicted protein (1242 aa)
     
 
  0.872
Phatr46132
Predicted protein (1007 aa)
     
 
  0.849
Phatr27735
Predicted protein (538 aa)
     
        0.803
Phatr5467
Predicted protein (190 aa)
       
 
  0.757
Phatr29174
Predicted protein (544 aa)
       
 
  0.757
Phatr22319
Predicted protein (577 aa)
       
 
  0.757
Phatr1457
Predicted protein (313 aa)
       
 
  0.757
CPS-II
Predicted protein (1542 aa)
     
      0.723
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
     
      0.723
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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