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GAPDH_3 protein (Phaeodactylum tricornutum) - STRING interaction network
"GAPDH_3" - Glyceraldehyde-3-phosphate dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPDH_3Glyceraldehyde-3-phosphate dehydrogenase (351 aa)    
Predicted Functional Partners:
TIM_1
Triosephosphate isomerase (268 aa)
  0.969
PGK
Phosphoglycerate kinase (448 aa)
  0.902
Phatr29157
Phosphoglycerate kinase (441 aa)
  0.888
FbaC5
Fructose-bisphosphate aldolase (358 aa)
   
  0.874
Phatr41702
Predicted protein (671 aa)
         
  0.801
Phatr48153
Predicted protein (520 aa)
         
    0.800
GPI_3
Glucose-6-phosphate isomerase; Belongs to the GPI family (518 aa)
   
 
  0.795
GPI_2
Glucose-6-phosphate isomerase; Belongs to the GPI family (551 aa)
   
 
  0.795
Fba4
Cytosolic aldolase (299 aa)
   
  0.790
Tkl
Transketolase (664 aa)
 
  0.788
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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