STRINGSTRING
Phatr23639 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23639" - Precursor of phosphorylase udp-glucose diphosphorylase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23639Precursor of phosphorylase udp-glucose diphosphorylase (712 aa)    
Predicted Functional Partners:
Phatr52603
Predicted protein (597 aa)
   
  0.688
Phatr43611
Predicted protein (474 aa)
       
      0.626
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
     
 
  0.508
PGM_1
Mutase phosphoglucomutase (600 aa)
     
 
  0.508
GFA1
Glutamine-fructose-6-phosphate transaminase (606 aa)
     
 
  0.507
Phatr48819
Predicted protein (681 aa)
   
  0.463
PGM_2
Phosphoglucomutase (528 aa)
   
  0.463
Phatr20504
Annotation not available (886 aa)
     
   
  0.461
TPS2
Bifunctional trehalose-6-phosphate synthase (779 aa)
     
   
  0.461
Phatr5857
Predicted protein (186 aa)
     
   
  0.445
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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