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Phatr23717 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23717" - Ferredoxin--NADP reductase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23717Ferredoxin--NADP reductase (340 aa)    
Predicted Functional Partners:
Phatr9538
Predicted protein (593 aa)
 
  0.964
Phatr19901
Predicted protein (900 aa)
   
  0.946
Phatr12902
Predicted protein (536 aa)
   
  0.938
CBP
Calcium binding protein (132 aa)
       
  0.819
CaM2
Calmodulin (154 aa)
       
  0.819
CaM1
Calmoduline (149 aa)
       
  0.819
Phatr21744
Predicted protein (149 aa)
       
  0.819
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
   
  0.804
Phatr12894
Predicted protein (403 aa)
   
 
  0.793
METH
Methionine synthase (1245 aa)
       
  0.752
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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