STRINGSTRING
Phatr23811 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23811" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23811Predicted protein (817 aa)    
Predicted Functional Partners:
APC8
Predicted protein (648 aa)
       
      0.961
Phatr52561
Predicted protein (675 aa)
       
      0.944
MCM6
Predicted protein (660 aa)
       
      0.944
Phatr31147
Predicted protein; Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) (559 aa)
 
 
  0.924
Phatr14626
Predicted protein (261 aa)
     
 
  0.909
Phatr25000
Predicted protein; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene) (221 aa)
 
 
  0.828
Phatr15948
Predicted protein (262 aa)
   
 
  0.764
Phatrdraft913
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (386 aa)
         
  0.596
Phatrdraft1572
Enolase (464 aa)
         
  0.486
Phatrdraft1192
Annotation not available (457 aa)
         
  0.486
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (8%) [HD]