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Phatr23830 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr23830" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr23830Predicted protein; Sodium-phosphate symporter which plays a fundamental housekeeping role in phosphate transport (497 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
         
  0.596
Phatrdraft462
Predicted protein (555 aa)
       
 
  0.529
Phatr46692
Predicted protein (566 aa)
       
 
  0.529
Phatr39515
Predicted protein (623 aa)
       
 
  0.529
Phatr17265
Predicted protein (663 aa)
       
 
  0.529
Phatr54983
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
         
  0.491
sufD
FeS assembly protein suf (690 aa)
   
   
  0.490
sufS
Cysteine desulfurase for iron-sulfur cluster formation suf (496 aa)
         
  0.483
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
   
  0.482
Phatrdraft972
Ammonium_transporter (540 aa)
           
  0.463
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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