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STRINGSTRING
AAT_2 protein (Phaeodactylum tricornutum) - STRING interaction network
"AAT_2" - Aspartate aminotransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAT_2Aspartate aminotransferase (426 aa)    
Predicted Functional Partners:
MDH
Predicted protein; Belongs to the LDH/MDH superfamily (324 aa)
     
  0.981
Phatr18337
Predicted protein (596 aa)
     
 
  0.967
Phatr45239
Predicted protein (1097 aa)
     
  0.952
Phatr13951
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family (450 aa)
     
  0.952
Phatr13175
Predicted protein (391 aa)
       
  0.940
Phatr30145
Citrate synthase; Belongs to the citrate synthase family (471 aa)
     
 
  0.936
Phatr26256
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (By similarity); Belongs to the adenylosuccinate synthetase family (526 aa)
   
 
  0.932
Phatr21116
Predicted protein; Argininosuccinate synthase (418 aa)
     
 
  0.930
Phatrdraft475
Predicted protein (464 aa)
     
  0.918
Phatr34010
Predicted protein (475 aa)
     
  0.918
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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