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GPI_3 protein (Phaeodactylum tricornutum) - STRING interaction network
"GPI_3" - Glucose-6-phosphate isomerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPI_3Glucose-6-phosphate isomerase (518 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
 
  0.992
TIM_1
Triosephosphate isomerase (268 aa)
   
 
  0.982
Phatr50738
Triosephosphate isomerase (290 aa)
   
 
  0.982
Phatr18228
Triosephosphate isomerase (298 aa)
   
 
  0.982
PGK
Phosphoglycerate kinase (448 aa)
   
   
  0.981
Phatr29157
Phosphoglycerate kinase (441 aa)
   
   
  0.981
Phatr14792
Phosphoglycerate kinase (432 aa)
   
   
  0.981
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
   
  0.948
PGM_1
Mutase phosphoglucomutase (600 aa)
   
  0.948
PFK_1
Phosphofructokinase (382 aa)
   
  0.920
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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