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Pt-KIF-1 protein (Phaeodactylum tricornutum) - STRING interaction network
"Pt-KIF-1" - Kinesin like protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pt-KIF-1Kinesin like protein (340 aa)    
Predicted Functional Partners:
Phatr54534
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (451 aa)
       
  0.697
Gamma-tub
Predicted protein; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (468 aa)
       
  0.697
Phatr21122
Predicted protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain (447 aa)
       
  0.697
Pt-MAD2
Mitotic checkpoint protein with homology with MAD2 (215 aa)
     
  0.677
DHC1
Predicted protein (4020 aa)
       
  0.631
Phatr47992
Predicted protein (432 aa)
       
  0.610
Phatr43122
MAP65_ASE1 (620 aa)
     
  0.602
Pt-BUB3
WD40 mitotic checkpoint-like protein similar to spleen mitotic checkpoint BUB3 (397 aa)
       
  0.595
EB1
Predicted protein (256 aa)
     
  0.585
Phatr10954
Predicted protein (209 aa)
     
  0.553
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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